- s -

• save() : TrapperConf
• saveDocument() : TrapperDoc
• saveExport() : TrapperDoc
• scroll() : TrapperApp
• scrollTo() : TrapperView
• scrollToNextCluster() : TrapperView
• secondaryIndex() : TrDb
• SecondaryIterator() : SecondaryIterator< FeatureData > , SecondaryIterator< ReadMetaData > , SecondaryIterator< ReadData > , SecondaryIterator< ChromatData > , SecondaryIterator< DnaStrData > , SecondaryIterator< ReadData > int , SecondaryIterator< SpatialFeatureData > , SecondaryIterator< TagData > , Database::SecondaryIterator< T >
• select() : TrapperView , Algo
• select_read() : MAl_Readonly
• selectAll() : TrapperView
• selectBetween() : TrapperView
• selectBetweenCols() : TrapperView
• selectCols() : TrapperView
• selectRows() : TrapperView
• sendMsg() : TrapperView
• set() : SecondaryIterator< FeatureData > , SecondaryIterator< ReadMetaData > , SecondaryIterator< ReadData > , SecondaryIterator< ChromatData > , SecondaryIterator< DnaStrData > , SecondaryIterator< ReadData > int , SecondaryIterator< SpatialFeatureData > , SecondaryIterator< TagData > , Database::SecondaryIterator< T >
• set_dnp_type() : DnpData
• set_dnpID() : DnpData
• set_file() : TcParser , MateParser
• set_result_array() : ChromatParser
• set_x_delta() : AlgoMoveParam
• set_y_delta() : AlgoMoveParam
• setAttributes() : Item , FeatureItem , LayerItem , ModeItem , RootItem
• setBeginGood() : ReadMetaData
• setClusterMinNum() : TrapperView
• setClusterWindow() : TrapperView
• setDbHomeDir() : TrapperApp
• setDragMode() : TrapperView
• setEndGood() : ReadMetaData
• setEndPos() : ReadData , SpatialFeatureData , FeatureData
• setFromRecno() : PrimaryIterator< ReadData > , Database::PrimaryIterator< T >
• setInfo() : TagData
• setMate() : ReadMetaData
• setMateLength() : ReadMetaData
• setMode() : ViewModes
• setModified() : TrapperDoc
• setName() : ReadMetaData
• setNormalizeTimeCourse() : TrapperView
• setPathName() : TrapperDoc
• setRange() : SecondaryIterator< ReadData > , SecondaryIterator< SpatialFeatureData > , SecondaryIterator< FeatureData > , SecondaryIterator< ReadMetaData > , SecondaryIterator< ChromatData > , SecondaryIterator< DnaStrData > , SecondaryIterator< ReadData > int , SecondaryIterator< TagData > , Database::SecondaryIterator< T >
• setReadRecno() : FeatureData
• setRecno() : GeneralData
• setRow() : ReadData
• setScore() : TagData
• setStartPos() : ReadData , SpatialFeatureData , FeatureData
• setStrand() : ReadMetaData
• setTextInListView() : FeatureItem , LayerItem , ModeItem
• setTitle() : TrapperDoc
• setViewModeConfFile() : TrapperApp
• setViewTimeCourse() : TrapperView
• setWindowCoord() : ReadsInRect
• ShowModesDlg() : ShowModesDlg
• shrink() : TrapperView
• size() : TrapperVector< T > , TrapperVector< Q_UINT32 > , TrapperVector< T >
• slotActivatedWindow() : TrapperApp
• slotChromatImport() : TrapperApp
• slotClearCenter() : TrapperView
• slotClusterNumChanged() : TrapperApp
• slotClusterWindowChanged() : TrapperApp
• slotConfigureViewModes() : TrapperApp
• slotContextSelect() : TrapperView
• slotCopyText() : InfoPopup
• slotCreateClient() : TrapperApp
• slotDragMode() : TrapperApp
• slotEditCopy() : TrapperApp
• slotEditCut() : TrapperApp
• slotEditFindRead() : TrapperApp
• slotEditFindTag() : TrapperApp
• slotEditPaste() : TrapperApp
• slotEditSelectAll() : TrapperApp
• slotEditSelectBetween() : TrapperApp
• slotEditSelectBetweenCols() : TrapperApp
• slotEditUndo() : TrapperApp
• slotEnlarge() : TrapperApp
• slotExport() : TrapperApp
• slotFileClose() : TrapperApp
• slotFileFlush() : TrapperApp
• slotFileNew() : TrapperApp
• slotFileOpen() : TrapperApp
• slotFilePrint() : TrapperApp
• slotFileQuit() : TrapperApp
• slotFileSave() : TrapperApp
• slotFileSaveAs() : TrapperApp
• slotHelpAbout() : TrapperApp
• slotHelpManual() : TrapperApp
• slotImport() : TrapperApp
• slotMateImport() : TrapperApp
• slotNewImport() : TrapperApp
• slotNormalizeTimeCourse() : TrapperApp
• slotNormalMode() : TrapperApp
• slotPhdImport() : TrapperApp
• slotScrollBackwards() : TrapperApp
• slotScrollForward() : TrapperApp
• slotScrollToMouse() : TrapperView
• slotScrollToPos() : TrapperView
• slotSetCenter() : TrapperView
• slotShowStatistics() : TrapperApp
• slotShrink() : TrapperApp
• slotStartAlgo() : TrapperView
• slotStatusHelpMsg() : TrapperApp
• slotSwitchToMode() : TrapperView
• slotTcImport() : TrapperApp
• slotViewStatusBar() : TrapperApp
• slotViewTimeCourse() : TrapperApp
• slotViewToolBar() : TrapperApp
• slotWindowNewWindow() : TrapperApp
• slotZoomIn() : TrapperApp
• slotZoomInX() : TrapperApp
• slotZoomInY() : TrapperApp
• slotZoomOut() : TrapperApp
• slotZoomOutX() : TrapperApp
• slotZoomOutY() : TrapperApp
• SpatialFeatureData() : SpatialFeatureData
• start() : Algo , MoveAlgo , RAlgo , StrandsAlgo , FindTaginfoAlgo , FindMatesAlgo , OptimizeLayoutAlgo
• startElement() : MacsimParser , TrapperParser , ChromatParser
• startPos() : FeatureData , SpatialFeatureData , ReadData
• statistics() : TrDb
• stlVector() : TrapperVector< T > , TrapperVector< Q_UINT32 >
• strand() : ReadMetaData
• StrandsAlgo() : StrandsAlgo
• sync() : TrDb

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