macsimparser.h

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#ifndef MACSIMPARSER_H
#define MACSIMPARSER_H

#include <qxml.h>
#include <qstringlist.h>
#include <db_cxx.h>
#include "qmap.h"
#include <vector>
#include <qstring.h>

class TrapperDoc;


class MacsimParser : public QXmlDefaultHandler
{

public:
  MacsimParser(DbEnv* dbenv, QString projectDir);
  
  bool startElement( const QString & namespaceURI, const QString & localName, 
                     const QString & qName, const QXmlAttributes & attributes);
  bool endElement( const QString & namespaceURI, const QString & localName, 
                   const QString & qName);
  
  bool characters ( const QString & ch );
  

  
private:

  QStringList contigNamesInProjectDir();


  DbEnv* env;
  QString projDir;
  
  TrapperDoc* current_doc;
  db_recno_t current_read_recno;
  bool format_ok;
  QMap<QString, QMap<QString, QString> > att_map;
  QMap<QString,QString> att_trans;
  QString curr_data;
  int curr_row;
  int curr_al_num;
  
  std::vector<std::vector<QString> > tags;
};

#endif //MACSIMPARSER_H

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